Knowledge Graph

Static graph sample showing the same node and edge shape that a future graph API can return dynamically.

Species

Arabidopsis thaliana

species:arabidopsis_thaliana

Species

Abies alba

species:abies_alba

Gene

Atha01G0000010.v1.36

gene:Atha01G0000010.v1.36

SequenceRecord

Aalbaalba5_s000000100000010.1.v1.0

seq:pgcp:abies_alba:v1:cds:Aalbaalba5_s000000100000010.1.v1.0

SequenceRecord

Aalbaalba5_s000000200000020.1.v1.0

seq:pgcp:abies_alba:v1:cds:Aalbaalba5_s000000200000020.1.v1.0

SequenceRecord

Atha01G0000010.1.v1.36

seq:pgcp:arabidopsis_thaliana:pgcp_atha_gene_json_202606:Atha01G0000010.1.v1.36

Dataset

PGCP Arabidopsis gene JSON snapshot

dataset:pgcp_atha_gene_json_202606

Dataset

Abies alba PGCP v1 CDS sequences

dataset:pgcp:abies_alba:v1:cds

Edges

Arabidopsis thaliana has_gene Atha01G0000010.v1.36
Atha01G0000010.v1.36 provided_by_dataset PGCP Arabidopsis gene JSON snapshot
Abies alba has_dataset Abies alba PGCP v1 CDS sequences
Abies alba PGCP v1 CDS sequences contains_sequence Aalbaalba5_s000000100000010.1.v1.0
Abies alba PGCP v1 CDS sequences contains_sequence Aalbaalba5_s000000200000020.1.v1.0
Atha01G0000010.v1.36 has_sequence Atha01G0000010.1.v1.36
PGCP Arabidopsis gene JSON snapshot contains_sequence Atha01G0000010.1.v1.36